Methods to set data slots for SpatialMap, Region, or Analysis objects
Setters.RdSetter functions take the object as the first argument and a new value as the
second. These functions allow a user to directly modify an object's data slot.
Each method implements checks on the validity of the object after the data
slot is modified. Use caution when applying Setters, since they modify the
objects in place, and cannot be undone.
Usage
projectMetadata(x) <- value
# S4 method for SpatialMap
projectMetadata(x) <- value
featureInfo(x) <- value
# S4 method for Region
featureInfo(x) <- value
features(x) <- value
# S4 method for Region
features(x) <- value
# S4 method for Analysis
features(x) <- value
# S4 method for list
features(x) <- value
# S4 method for list
features(x) <- value
# S4 method for SpatialMap
features(x) <- value
cells(x) <- value
# S4 method for Region,list
cells(x) <- value
# S4 method for Region,character
cells(x) <- value
# S4 method for Analysis,list
cells(x) <- value
channelInfo(x) <- value
# S4 method for Region
channelInfo(x) <- value
bgData(x) <- value
# S4 method for Region
bgData(x) <- value
bgFeatures(x) <- value
# S4 method for Region
bgFeatures(x) <- valueArguments
- x
A SpatialMap or Region object
- value
If applicable, a character string specifying which named item
Details
Setter functions are supplemented by helper functions, such as addCellMetadata
and updateRegionData, that provide a high-level API into the S4
objects, with more comprehensive validity checks, error messages, and a smoother, more flexible user interface.
Getter methods correspond to data slots in the S4 objects:
projectMetadata<-(SpatialMap)cells<-features<-activeRegions<-(SpatialMap)activeAnalysis<-(SpatialMap)cellMetadata<-featureInfo<-bgData<-