Log transform biomarker expressions — log_normalize_region • SpatialMap

Log transformation (log10 + 1) of all biomarker expressions.

Usage

log_normalize_region(region, to = "NormalizedData", from = "Data")

Arguments

region: A Region object, or concatenated data generated by .smapply.
to: Which data slot to assign the normalized data to.
from: Which data slot to pull data from.

Value

An updated Region object with normalized data added to the slot specified in to

See also