Compute Wilcox test for expression differences between groups of cells

Groups are passed in as indices or data colnames

Usage

differential_wilcox(
  group1,
  group2,
  dat,
  min.value = 0,
  dat.names = NULL,
  diffs = "fold change",
  quietly = F
)

Arguments

group1

Integer or character vector defining group 1

group2

Integer or character vector defining group 2

dat

A data matrix

min.value

A minimum value to pre-filter cells from testing

dat.names

Data names

diffs

Definition of output differential. Fold change or difference in mean?

quietly

To not print output